Contour interpolated radial basis functions with spline boundary correction for fast 3D reconstruction of the human articular cartilage from MR images

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dc.contributor.author Javaid, Zarrar en
dc.contributor.author Boocock, MG en
dc.contributor.author McNair, PJ en
dc.contributor.author Unsworth, Charles en
dc.date.accessioned 2017-09-17T23:51:00Z en
dc.date.issued 2016-03 en
dc.identifier.citation Medical Physics 43(3):1187-1199 Mar 2016 en
dc.identifier.issn 0094-2405 en
dc.identifier.uri http://hdl.handle.net/2292/35679 en
dc.description.abstract The aim of this work is to demonstrate a new image processing technique that can provide a "near real-time" 3D reconstruction of the articular cartilage of the human knee from MR images which is user friendly. This would serve as a point-of-care 3D visualization tool which would benefit a consultant radiologist in the visualization of the human articular cartilage.The authors introduce a novel fusion of an adaptation of the contour method known as "contour interpolation (CI)" with radial basis functions (RBFs) which they describe as "CI-RBFs." The authors also present a spline boundary correction which further enhances volume estimation of the method. A subject cohort consisting of 17 right nonpathological knees (ten female and seven male) is assessed to validate the quality of the proposed method. The authors demonstrate how the CI-RBF method dramatically reduces the number of data points required for fitting an implicit surface to the entire cartilage, thus, significantly improving the speed of reconstruction over the comparable RBF reconstruction method of Carr. The authors compare the CI-RBF method volume estimation to a typical commercial package (3d doctor), Carr's RBF method, and a benchmark manual method for the reconstruction of the femoral, tibial, and patellar cartilages.The authors demonstrate how the CI-RBF method significantly reduces the number of data points (p-value < 0.0001) required for fitting an implicit surface to the cartilage, by 48%, 31%, and 44% for the patellar, tibial, and femoral cartilages, respectively. Thus, significantly improving the speed of reconstruction (p-value < 0.0001) by 39%, 40%, and 44% for the patellar, tibial, and femoral cartilages over the comparable RBF model of Carr providing a near real-time reconstruction of 6.49, 8.88, and 9.43 min for the patellar, tibial, and femoral cartilages, respectively. In addition, it is demonstrated how the CI-RBF method matches the volume estimation of a typical commercial package (3d doctor), Carr's RBF method, and a benchmark manual method for the reconstruction of the femoral, tibial, and patellar cartilages. Furthermore, the performance of the segmentation method used for the extraction of the femoral, tibial, and patellar cartilages is assessed with a Dice similarity coefficient, sensitivity, and specificity measure providing high agreement to manual segmentation.The CI-RBF method provides a fast, accurate, and robust 3D model reconstruction that matches Carr's RBF method, 3d doctor, and a manual benchmark method in accuracy and significantly improves upon Carr's RBF method in data requirement and computational speed. In addition, the visualization tool has been designed to quickly segment MR images requiring only four mouse clicks per MR image slice. en
dc.format.medium Print en
dc.language eng en
dc.publisher American Association of Physicists in Medicine en
dc.relation.ispartofseries Medical Physics en
dc.rights Items in ResearchSpace are protected by copyright, with all rights reserved, unless otherwise indicated. Previously published items are made available in accordance with the copyright policy of the publisher. en
dc.rights.uri https://researchspace.auckland.ac.nz/docs/uoa-docs/rights.htm en
dc.subject Knee en
dc.subject Cartilage, Articular en
dc.subject Humans en
dc.subject Imaging, Three-Dimensional en
dc.subject Magnetic Resonance Imaging en
dc.subject Time Factors en
dc.subject Female en
dc.subject Male en
dc.title Contour interpolated radial basis functions with spline boundary correction for fast 3D reconstruction of the human articular cartilage from MR images en
dc.type Journal Article en
dc.identifier.doi 10.1118/1.4941076 en
pubs.issue 3 en
pubs.begin-page 1187 en
pubs.volume 43 en
dc.rights.holder Copyright: American Association of Physicists in Medicine en
dc.identifier.pmid 26936704 en
pubs.end-page 1199 en
pubs.publication-status Published en
dc.rights.accessrights http://purl.org/eprint/accessRights/RestrictedAccess en
pubs.subtype Article en
pubs.elements-id 524274 en
pubs.org-id Engineering en
pubs.org-id Engineering Science en
dc.identifier.eissn 2473-4209 en
pubs.record-created-at-source-date 2017-09-18 en
pubs.dimensions-id 26936704 en


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