Improved high-level synthesis for complex CellML models

Liebig, B; Oppermann, J; Sinnen, Oliver; Koch, A

dc.contributor.author	Liebig, B	en
dc.contributor.author	Oppermann, J	en
dc.contributor.author	Sinnen, Oliver	en
dc.contributor.author	Koch, A	en
dc.date.accessioned	2018-10-17T02:46:08Z	en
dc.date.issued	2018-01-01	en
dc.identifier.citation	Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 10824 LNCS: 420-432. 01 Jan 2018	en
dc.identifier.isbn	9783319788890	en
dc.identifier.issn	0302-9743	en
dc.identifier.uri	http://hdl.handle.net/2292/42518	en
dc.description.abstract	© Springer International Publishing AG, part of Springer Nature 2018. In this work, we present the use of a new high-level synthesis engine capable of generating resource-shared compute accelerators, even from very complex double-precision codes, for cell biology simulations. From the domain-specific CellML description, the compilation pipeline is able to generate hardware that is shown to achieve a performance similar to or exceeding current generation desktop CPUs, and has energy savings of up to 96% even for a single accelerator, which requires just 25–30% area on a mid-sized FPGA.	en
dc.relation.ispartofseries	Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)	en
dc.rights	Items in ResearchSpace are protected by copyright, with all rights reserved, unless otherwise indicated. Previously published items are made available in accordance with the copyright policy of the publisher.	en
dc.rights	This is a post-peer-review, pre-copyedit version of an article published in Lecture Notes in Computer Science. The final authenticated version is available online at: http://dx.doi.org/10.1007/978-3-319-78890-6_34	en
dc.rights.uri	https://researchspace.auckland.ac.nz/docs/uoa-docs/rights.htm	en
dc.rights.uri	https://www.springer.com/gb/open-access/authors-rights/self-archiving-policy/2124	en
dc.title	Improved high-level synthesis for complex CellML models	en
dc.type	Conference Item	en
dc.identifier.doi	10.1007/978-3-319-78890-6_34	en
pubs.begin-page	420	en
pubs.volume	10824 LNCS	en
dc.rights.holder	Copyright: Springer	en
pubs.end-page	432	en
pubs.publication-status	Published	en
dc.rights.accessrights	http://purl.org/eprint/accessRights/OpenAccess	en
pubs.elements-id	740548	en
pubs.org-id	Engineering	en
pubs.org-id	Department of Electrical, Computer and Software Engineering	en
dc.identifier.eissn	1611-3349	en