Detection of smoking status from retinal images; a Convolutional Neural Network study

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dc.contributor.author Vaghefi Rezaei, Seyed en
dc.contributor.author Song, Y en
dc.contributor.author Hill, S en
dc.contributor.author Humphrey, Gayle en
dc.contributor.author Greenaway, Natalie en
dc.contributor.author Squirrell, D en
dc.date.accessioned 2019-05-28T21:45:04Z en
dc.date.issued 2019-05-09 en
dc.identifier.citation Scientific reports 9(1):7180 09 May 2019 en
dc.identifier.issn 2045-2322 en
dc.identifier.uri http://hdl.handle.net/2292/46834 en
dc.description.abstract Cardiovascular diseases are directly linked to smoking habits, which has both physiological and anatomical effects on the systemic and retinal circulations, and these changes can be detected with fundus photographs. Here, we aimed to 1- design a Convolutional Neural Network (CNN), using retinal photographs, to differentiate between smokers and non-smokers; and 2- use the attention maps to better understand the physiological changes that occur in the retina in smokers. 165,104 retinal images were obtained from a diabetes screening programme, labelled with self-reported “smoking” or “non- smoking” status. The images were pre-processed in one of two ways, either “contrast-enhanced” or “skeletonized”. Experiments were run on an Intel Xeon Gold 6128 CPU @ 3.40 GHz with 16 GB of RAM memory and a NVIDIA GeForce TiTan V VOLTA 12 GB, for 20 epochs. The dataset was split 80/20 for training and testing sets, respectively. The overall validation outcomes for the contrast-enhanced model were accuracy 88.88%, specificity 93.87%. In contrast, the outcomes of the skeletonized model were accuracy 63.63%, specificity 65.60%. The “attention maps” that were generated of the contrast-enhanced model highlighted the retinal vasculature, perivascular region and the fovea most prominently. We trained a customized CNN to accurately determine smoking status. The retinal vasculature, the perivascular region and the fovea appear to be important predictive features in the determination of smoking status. Despite a high degree of accuracy, the sensitivity of our CNN was low. Further research is required to establish whether the frequency, duration, and dosage (quantity) of smoking would improve the sensitivity of the CNN. en
dc.publisher Nature Publishing Group en
dc.relation.ispartofseries Scientific Reports en
dc.rights Items in ResearchSpace are protected by copyright, with all rights reserved, unless otherwise indicated. Previously published items are made available in accordance with the copyright policy of the publisher. en
dc.rights.uri https://researchspace.auckland.ac.nz/docs/uoa-docs/rights.htm en
dc.rights.uri https://creativecommons.org/licenses/by/4.0/ en
dc.title Detection of smoking status from retinal images; a Convolutional Neural Network study en
dc.type Journal Article en
dc.identifier.doi 10.1038/s41598-019-43670-0 en
pubs.issue 1 en
pubs.volume 9 en
dc.rights.holder Copyright: The authors en
pubs.author-url https://rdcu.be/bAYsK en
pubs.declined 2019-05-12T17:33:03.703+1200 en
dc.rights.accessrights http://purl.org/eprint/accessRights/OpenAccess en
pubs.subtype Article en
pubs.elements-id 771871 en
pubs.org-id Bioengineering Institute en
pubs.org-id ABI Associates en
pubs.org-id Medical and Health Sciences en
pubs.org-id Optometry and Vision Science en
pubs.org-id Population Health en
pubs.org-id Pacific Health en
pubs.number 7180 en
pubs.record-created-at-source-date 2019-05-10 en
pubs.dimensions-id 31073220 en


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