Abstract:
This interdisciplinary thesis reports a combination of engineering, physics, biology and
chemistry to create a centrifugal microfluidic system (CMS), methods of fast
prototyping of microfluidic disks and advancements in microfabrication to solve
problems in the dairy industry. The case study used was the quantification of fat
concentration and progesterone in milk, two of the most valuable measurements needed
in production optimisation.
This thesis describes in detail the assembly, rationale behind the software user interface
(UI) and hardware necessary to make a robust and flexible CMS. The detection method
was optical imaging. Therefore, careful studies related to different light emitting
sources and the use of a complementary metal oxide semiconductor (CMOS) camera
as a detector were carried out. Camera parameters that determined detection sensitivity,
such as the gamma coefficient, were optimised. Different imaging analysis software
tools were developed and are explained through diagrams and code. Furthermore, this
research project identified the advantages and disadvantages of using different
materials and background colours in the microfluidic disks.
Rapid, simple microchannel prototyping is critical for the development of modern
microfluidic devices and platforms. Laser cutting (ablation) using a commercially
available continuous wave (CW) CO2 laser followed by thermal bonding is one of the
most common approaches for prototyping in thermoplastics such as polymethyl
methacrylate (PMMA). However, this technique suffers from poorly controlled channel
quality, inconsistent results from solvent-based post-processing, and inconsistency of
thermal bonding. This research project has overcome these challenges and developed a
method to produce rapid, high-quality microchannels in PMMA that are well suited for
rapid prototyping of microfluidic devices and platforms. A systematic study was used
to demonstrate the channel ablation in PMMA using a CW CO2 laser, and detailed the
effects of experimental parameters on channel dimensions and quality. A new solvent
treatment approach using isopropyl alcohol at boiling temperature resulted in clearly
improved microchannel quality and processing consistency, with negligible residual
solvent verified by Fourier-transform infrared spectroscopy (FTIR). Thermal bonding
of the processed material showed four-fold increase in bonding strength with full
retention of PMMA’s favourable optical clarity. As proof of concept, a high-quality
microfluidic prototype in a 3-layered microfluidic design was fabricated and its
performance demonstrated with this new method.
The fat concentration in milk was measured by centrifugation on a disc, both by
measuring the change in scattered light intensity at a fixed position as a function of
time, and by measuring the width of the band of fat formed as a consequence of the
centrifugation. Both measurements could be completed in less than 180 seconds. The
coefficient of determination (R2) for the first method was 0.942 with coefficient of
variation (CV) of 4.1%, and that for the second was 0.923 and 4.9%. Furthermore, the
same experiments were done using multiple sample analysis (two samples
concurrently) and resulted in R2 up to 0.936 and CV of 6.6% using the light scattering
as function of time, whereas the use of the fat band development resulted in 0.887 and
7.0%.
Two bioassay methodologies were developed for the detection of low levels of
progesterone in undiluted milk. The first assay was based on the use of a single bead,
filter tips and centrifuge tubes. This bioassay protocol took approximately 28 minutes
and lead to a R2 of 0.959 within <0.625 to 20 ng/ml with CV of 3.9%. The second
bioassay involved the transfer of the bead assay to a microfluidic disk. The use of the
lab-on-a-disk technique decreased the assay time to approximately 22 minutes and
allowed for the measurement of progesterone concentration in the range of 0.625ng/ml
to 5ng/ml with R2 of 0.943 and CV of 7.2%. Gelation of the milk samples was
investigated, showing disadvantages in using homogenised commercial milk as
samples. The shelf-life of the beads was improved using sucrose – tween solutions to
coat the beads when they were dried and allowed for bead storage in the disk.
Finally, a method has been demonstrated of improving the fluid control in microfluidic
channels through the creation of superhydrophobic and superhydrophilic microfluidic
valves in polycarbonate by laser modification. Surface wettability was dramatically
changed by laser treatment and was dramatically different with different pulse-length
and wavelength. Use of a femtosecond (fs) laser at 800nm increased contact angle from
~80o up to ~160o, whilst use of a nanosecond (ns) laser at 248nm generated
superhydrophilic surfaces. The surface roughness of the hydrophobic surface was
substantially increased compared to the control and hydrophilic surface. Further
investigation through FTIR and x-ray photoelectric spectroscopy (XPS) demonstrated
that chemical modifications occurred in the ablated samples, where it was found an
increase in the hydrophilic chemical groups in both surfaces, but with higher levels in
the nanosecond laser modified surface. The coverage of hydrophilic groups was
sufficient to cause the surface to become superhydrophilic. The chemical and
morphology modification led to a Wenzel state for the superhydrophobic surfaces. The
superhydrophilic surface was characteristic of a Cassie state.
The laser generated valves comprised a section of altered wettability laser-fabricated in
the base and top of a channel. Change in interfacial tension at the boundary between
two sections of different wettability resulted in a difference in the pressure, provided
by the centrifugal force, required to force the fluid past the modification. Tests using
the CMS showed an increase of 29% in the pressure needed to pass through pass a
droplet through a microchannel modified with the hydrophobic valves. The use of
superhydrophilic valves resulted in high wettability and decrease of 39% in the pressure
necessary for the fluid to pass through the channel. However, the high difference in
wettability between modified and unmodified area also worked as means to increase
the pressure by holding the water droplet in the superhydrophilic region.