CellML metadata standards, associated tools and repositories

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dc.contributor.author Beard, DA en
dc.contributor.author Britten, Randall en
dc.contributor.author Cooling, Michael en
dc.contributor.author Garny, Alan en
dc.contributor.author Halstead, MDB en
dc.contributor.author Hunter, Peter en
dc.contributor.author Lawson, James en
dc.contributor.author Lloyd, Catherine en
dc.contributor.author Marsh, Justin en
dc.contributor.author Miller, Andrew en
dc.contributor.author Nickerson, David en
dc.contributor.author Nielsen, Poul en
dc.contributor.author Nomura, T en
dc.contributor.author Subramanium, S en
dc.contributor.author Wimalaratne, Sarala en
dc.contributor.author Yu, Yan Hei en
dc.date.accessioned 2011-08-16T03:37:25Z en
dc.date.issued 2009-05-28 en
dc.identifier.citation Philosophical Transactions A: Mathematical, Physical and Engineering Sciences 367(1895):1845-1867 28 May 2009 en
dc.identifier.issn 1471-2962 en
dc.identifier.uri http://hdl.handle.net/2292/7378 en
dc.description.abstract The development of standards for encoding mathematical models is an important component of model building and model sharing among scientists interested in understanding multi-scale physiological processes. CellML provides such a standard, particularly for models based on biophysical mechanisms, and a substantial number of models are now available in the CellML Model Repository. However, there is an urgent need to extend the current CellML metadata standard to provide biological and biophysical annotation of the models in order to facilitate model sharing, automated model reduction and connection to biological databases. This paper gives a broad overview of a number of new developments on CellML metadata and provides links to further methodological details available from the CellML website. en
dc.description.uri http://hdl.handle.net/2292/7378 en
dc.relation.ispartofseries Philosophical Transactions of the Royal Society A en
dc.rights Items in ResearchSpace are protected by copyright, with all rights reserved, unless otherwise indicated. Previously published items are made available in accordance with the copyright policy of the publisher. Details obtained from http://www.sherpa.ac.uk/romeo/issn/1364-503X/ en
dc.rights.uri https://researchspace.auckland.ac.nz/docs/uoa-docs/rights.htm en
dc.subject CellML mark-up languages metadata modelling en
dc.title CellML metadata standards, associated tools and repositories en
dc.type Journal Article en
dc.identifier.doi 10.1098/rsta.2008.0310 en
pubs.issue 1895 en
pubs.begin-page 1845 en
pubs.volume 367 en
dc.rights.holder Copyright: 2009 The Royal Society en
dc.identifier.pmid 19380315 en
pubs.author-url http://rsta.royalsocietypublishing.org/content/367/1895/1845 en
pubs.end-page 1867 en
dc.rights.accessrights http://purl.org/eprint/accessRights/RestrictedAccess en
pubs.subtype Article en
pubs.elements-id 153224 en
pubs.org-id Bioengineering Institute en
pubs.org-id ABI Associates en
pubs.org-id Engineering en
pubs.org-id Engineering Science en
pubs.org-id Science en
pubs.org-id Science Research en
pubs.org-id Maurice Wilkins Centre (2010-2014) en
pubs.record-created-at-source-date 2010-09-01 en
pubs.dimensions-id 19380315 en

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